Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 PTENP1-202ENST00000532280 3996 ntBASIC13.82□□□□□ -0.2
CXCR4P61073 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CXCR4P61073 MCCD1P2-201ENST00000423228 335 ntBASIC13.82□□□□□ -0.2
CXCR4P61073 FDX1P1-201ENST00000449115 551 ntBASIC13.82□□□□□ -0.2
CXCR4P61073 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCR4P61073 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCR4P61073 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCR4P61073 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCR4P61073 AC055717.3-201ENST00000622967 595 ntBASIC13.82□□□□□ -0.2
CXCR4P61073 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCR4P61073 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCR4P61073 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CXCR4P61073 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCR4P61073 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CXCR4P61073 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 AC020910.6-201ENST00000623084 1459 ntBASIC13.81□□□□□ -0.2
CXCR4P61073 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCR4P61073 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCR4P61073 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCR4P61073 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCR4P61073 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCR4P61073 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCR4P61073 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.81□□□□□ -0.2
CXCR4P61073 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCR4P61073 AC105021.1-202ENST00000570572 669 ntBASIC13.81□□□□□ -0.2
CXCR4P61073 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCR4P61073 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.81□□□□□ -0.2
CXCR4P61073 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
CXCR4P61073 AC025181.2-201ENST00000606994 802 ntBASIC13.81□□□□□ -0.2
CXCR4P61073 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCR4P61073 C20orf181-201ENST00000623918 480 ntBASIC13.81□□□□□ -0.2
CXCR4P61073 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCR4P61073 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms