Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.7■□□□□ 0.1
EPHB3P54753 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.7■□□□□ 0.1
EPHB3P54753 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EPHB3P54753 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EPHB3P54753 AC136621.1-201ENST00000624017 2304 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 AC010141.1-201ENST00000411585 623 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 AC011742.3-201ENST00000439053 820 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.69■□□□□ 0.1
EPHB3P54753 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.69■□□□□ 0.1
EPHB3P54753 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 AC013355.1-201ENST00000562625 723 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.69■□□□□ 0.1
EPHB3P54753 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 AC009955.4-201ENST00000597192 544 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 AC008825.2-201ENST00000603374 718 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 AC106872.11-201ENST00000605838 421 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 AC091544.8-201ENST00000619490 361 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
EPHB3P54753 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 MROH4P-201ENST00000431302 1578 ntBASIC15.69■□□□□ 0.1
EPHB3P54753 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.69■□□□□ 0.1
EPHB3P54753 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EPHB3P54753 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.69■□□□□ 0.1
EPHB3P54753 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 AC004899.1-201ENST00000424687 1714 ntBASIC15.68■□□□□ 0.1
EPHB3P54753 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
EPHB3P54753 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.68■□□□□ 0.1
EPHB3P54753 SSR4P1-203ENST00000599569 2260 ntBASIC15.68■□□□□ 0.1
EPHB3P54753 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
EPHB3P54753 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EPHB3P54753 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
EPHB3P54753 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms