Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.28■□□□□ 0.04
LIMK2P53671 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.28■□□□□ 0.04
LIMK2P53671 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LIMK2P53671 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIMK2P53671 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.27■□□□□ 0.04
LIMK2P53671 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.27■□□□□ 0.04
LIMK2P53671 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.27■□□□□ 0.04
LIMK2P53671 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LIMK2P53671 AC139749.1-202ENST00000617529 3139 ntBASIC15.27■□□□□ 0.04
LIMK2P53671 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.27■□□□□ 0.04
LIMK2P53671 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.27■□□□□ 0.04
LIMK2P53671 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.27■□□□□ 0.04
LIMK2P53671 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.27■□□□□ 0.04
LIMK2P53671 AC036164.1-201ENST00000570544 333 ntBASIC15.27■□□□□ 0.04
LIMK2P53671 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIMK2P53671 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LIMK2P53671 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIMK2P53671 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.27■□□□□ 0.03
LIMK2P53671 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LIMK2P53671 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIMK2P53671 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LIMK2P53671 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIMK2P53671 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LIMK2P53671 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
LIMK2P53671 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIMK2P53671 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIMK2P53671 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LIMK2P53671 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.27■□□□□ 0.03
LIMK2P53671 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LIMK2P53671 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIMK2P53671 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.27■□□□□ 0.03
LIMK2P53671 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIMK2P53671 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK2P53671 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
LIMK2P53671 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.26■□□□□ 0.03
LIMK2P53671 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.26■□□□□ 0.03
LIMK2P53671 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.26■□□□□ 0.03
LIMK2P53671 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.26■□□□□ 0.03
LIMK2P53671 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.26■□□□□ 0.03
LIMK2P53671 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LIMK2P53671 MIR6805-201ENST00000615055 62 ntBASIC15.26■□□□□ 0.03
LIMK2P53671 AL158212.4-201ENST00000624062 1286 ntBASIC15.26■□□□□ 0.03
LIMK2P53671 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.26■□□□□ 0.03
LIMK2P53671 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
LIMK2P53671 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.26■□□□□ 0.03
LIMK2P53671 OR2I1P-210ENST00000642037 4691 ntBASIC15.26■□□□□ 0.03
LIMK2P53671 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
LIMK2P53671 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.26■□□□□ 0.03
LIMK2P53671 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIMK2P53671 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms