Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KRT8P35-201ENST00000483942 1338 ntBASIC13.79□□□□□ -0.2
HMGA2P52926 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HMGA2P52926 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 CLK3P2-201ENST00000427566 1453 ntBASIC13.79□□□□□ -0.2
HMGA2P52926 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.79□□□□□ -0.2
HMGA2P52926 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGA2P52926 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 MYADML-201ENST00000474610 2147 ntBASIC13.78□□□□□ -0.2
HMGA2P52926 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HMGA2P52926 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.78□□□□□ -0.2
HMGA2P52926 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 AL596442.2-201ENST00000610240 980 ntBASIC13.78□□□□□ -0.2
HMGA2P52926 MIR6074-201ENST00000612054 107 ntBASIC13.78□□□□□ -0.2
HMGA2P52926 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.78□□□□□ -0.2
HMGA2P52926 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 AC011840.2-201ENST00000563063 1520 ntBASIC13.78□□□□□ -0.2
HMGA2P52926 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HMGA2P52926 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGA2P52926 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.78□□□□□ -0.2
HMGA2P52926 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGA2P52926 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.77□□□□□ -0.2
HMGA2P52926 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGA2P52926 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.77□□□□□ -0.2
HMGA2P52926 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGA2P52926 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.77□□□□□ -0.2
HMGA2P52926 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGA2P52926 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGA2P52926 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
HMGA2P52926 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.77□□□□□ -0.21
HMGA2P52926 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 AC211486.1-202ENST00000416371 468 ntBASIC13.77□□□□□ -0.21
HMGA2P52926 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HMGA2P52926 UPF3AP3-201ENST00000420996 769 ntBASIC13.77□□□□□ -0.21
HMGA2P52926 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGA2P52926 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.77□□□□□ -0.21
HMGA2P52926 BTBD7P1-201ENST00000447253 1453 ntBASIC13.77□□□□□ -0.21
HMGA2P52926 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.77□□□□□ -0.21
HMGA2P52926 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGA2P52926 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGA2P52926 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HMGA2P52926 AC211476.1-201ENST00000503899 468 ntBASIC13.77□□□□□ -0.21
HMGA2P52926 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HMGA2P52926 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms