Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
UBE2AP49459 AC007686.3-201ENST00000619017 3487 ntBASIC9.69□□□□□ -0.86
UBE2AP49459 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
UBE2AP49459 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
UBE2AP49459 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
UBE2AP49459 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE2AP49459 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
UBE2AP49459 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC9.68□□□□□ -0.86
UBE2AP49459 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
UBE2AP49459 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 AC126365.1-201ENST00000578585 1514 ntBASIC9.68□□□□□ -0.86
UBE2AP49459 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 FO538757.1-201ENST00000623083 1397 ntBASIC9.68□□□□□ -0.86
UBE2AP49459 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
UBE2AP49459 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 DNAJB3-202ENST00000449667 1266 ntBASIC9.68□□□□□ -0.86
UBE2AP49459 PTK7-212ENST00000476760 902 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC9.68□□□□□ -0.86
UBE2AP49459 IGHV3-42-201ENST00000520410 361 ntBASIC9.68□□□□□ -0.86
UBE2AP49459 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 AC069120.2-201ENST00000524091 540 ntBASIC9.68□□□□□ -0.86
UBE2AP49459 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 BANF1P1-201ENST00000553684 263 ntBASIC9.68□□□□□ -0.86
UBE2AP49459 CMC2-214ENST00000565925 640 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 METTL23-205ENST00000588302 925 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 AC097359.3-201ENST00000603982 1210 ntBASIC9.68□□□□□ -0.86
UBE2AP49459 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC9.68□□□□□ -0.86
UBE2AP49459 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
UBE2AP49459 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 MECR-202ENST00000373791 2416 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE2AP49459 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE2AP49459 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE2AP49459 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
UBE2AP49459 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
UBE2AP49459 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms