Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SOX2P48431 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SOX2P48431 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.39□□□□□ -0.27
SOX2P48431 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 AL627223.1-201ENST00000416693 442 ntBASIC13.39□□□□□ -0.27
SOX2P48431 AC004832.2-201ENST00000426397 482 ntBASIC13.39□□□□□ -0.27
SOX2P48431 POLD2P1-201ENST00000511220 997 ntBASIC13.39□□□□□ -0.27
SOX2P48431 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.39□□□□□ -0.27
SOX2P48431 AL079307.3-201ENST00000556114 283 ntBASIC13.39□□□□□ -0.27
SOX2P48431 AC093520.2-201ENST00000561830 333 ntBASIC13.39□□□□□ -0.27
SOX2P48431 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.39□□□□□ -0.27
SOX2P48431 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 MTDHP5-201ENST00000598980 586 ntBASIC13.39□□□□□ -0.27
SOX2P48431 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.39□□□□□ -0.27
SOX2P48431 MIR6069-201ENST00000620069 79 ntBASIC13.39□□□□□ -0.27
SOX2P48431 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SOX2P48431 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.39□□□□□ -0.27
SOX2P48431 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SOX2P48431 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.38□□□□□ -0.27
SOX2P48431 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.38□□□□□ -0.27
SOX2P48431 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SOX2P48431 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SOX2P48431 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SOX2P48431 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
SOX2P48431 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SOX2P48431 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
SOX2P48431 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
SOX2P48431 SPDYE14P-201ENST00000442619 822 ntBASIC13.38□□□□□ -0.27
SOX2P48431 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.38□□□□□ -0.27
SOX2P48431 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.38□□□□□ -0.27
SOX2P48431 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.38□□□□□ -0.27
SOX2P48431 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.38□□□□□ -0.27
SOX2P48431 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.38□□□□□ -0.27
SOX2P48431 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.38□□□□□ -0.27
SOX2P48431 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SOX2P48431 AC026150.2-201ENST00000564693 1156 ntBASIC13.38□□□□□ -0.27
SOX2P48431 MIR4453-201ENST00000584019 89 ntBASIC13.38□□□□□ -0.27
SOX2P48431 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.38□□□□□ -0.27
SOX2P48431 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.38□□□□□ -0.27
SOX2P48431 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
SOX2P48431 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SOX2P48431 AL121894.2-201ENST00000602977 491 ntBASIC13.38□□□□□ -0.27
SOX2P48431 AL589739.1-201ENST00000607720 493 ntBASIC13.38□□□□□ -0.27
SOX2P48431 MIR6080-201ENST00000617359 66 ntBASIC13.38□□□□□ -0.27
SOX2P48431 LINC00628-201ENST00000628516 1289 ntBASIC13.38□□□□□ -0.27
SOX2P48431 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms