Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.6■□□□□ 0.25
USP8P40818 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.6■□□□□ 0.25
USP8P40818 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP8P40818 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
USP8P40818 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
USP8P40818 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.59■□□□□ 0.25
USP8P40818 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
USP8P40818 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.59■□□□□ 0.25
USP8P40818 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.59■□□□□ 0.25
USP8P40818 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.59■□□□□ 0.25
USP8P40818 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
USP8P40818 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.59■□□□□ 0.25
USP8P40818 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.59■□□□□ 0.25
USP8P40818 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.59■□□□□ 0.25
USP8P40818 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.59■□□□□ 0.25
USP8P40818 AL158212.4-201ENST00000624062 1286 ntBASIC16.59■□□□□ 0.25
USP8P40818 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.59■□□□□ 0.25
USP8P40818 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
USP8P40818 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
USP8P40818 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 AC005840.4-201ENST00000541242 2494 ntBASIC16.59■□□□□ 0.25
USP8P40818 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
USP8P40818 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.59■□□□□ 0.25
USP8P40818 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP8P40818 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP8P40818 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
USP8P40818 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP8P40818 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
USP8P40818 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.58■□□□□ 0.25
USP8P40818 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP8P40818 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
USP8P40818 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP8P40818 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.58■□□□□ 0.25
USP8P40818 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP8P40818 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
USP8P40818 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.58■□□□□ 0.25
USP8P40818 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP8P40818 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.58■□□□□ 0.24
USP8P40818 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.58■□□□□ 0.24
USP8P40818 MRPS18AP1-201ENST00000414458 589 ntBASIC16.58■□□□□ 0.24
USP8P40818 INGX-202ENST00000489074 768 ntBASIC16.58■□□□□ 0.24
USP8P40818 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 WASH3P-207ENST00000560956 1394 ntBASIC16.58■□□□□ 0.24
USP8P40818 CLK3P2-201ENST00000427566 1453 ntBASIC16.58■□□□□ 0.24
USP8P40818 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.58■□□□□ 0.24
USP8P40818 MROH4P-201ENST00000431302 1578 ntBASIC16.58■□□□□ 0.24
USP8P40818 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
USP8P40818 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
USP8P40818 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
USP8P40818 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.58■□□□□ 0.24
USP8P40818 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
USP8P40818 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USP8P40818 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.57■□□□□ 0.24
USP8P40818 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.57■□□□□ 0.24
USP8P40818 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 ZBED1P1-201ENST00000502364 1930 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms