Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDE6BP35913 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDE6BP35913 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.42■□□□□ 0.54
PDE6BP35913 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.41■□□□□ 0.54
PDE6BP35913 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.41■□□□□ 0.54
PDE6BP35913 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PDE6BP35913 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PDE6BP35913 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.41■□□□□ 0.54
PDE6BP35913 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PDE6BP35913 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.41■□□□□ 0.54
PDE6BP35913 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.41■□□□□ 0.54
PDE6BP35913 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 AL627422.1-201ENST00000434104 580 ntBASIC18.41■□□□□ 0.54
PDE6BP35913 AC012362.1-201ENST00000434906 739 ntBASIC18.41■□□□□ 0.54
PDE6BP35913 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.41■□□□□ 0.54
PDE6BP35913 RBM8B-201ENST00000555532 525 ntBASIC18.41■□□□□ 0.54
PDE6BP35913 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PDE6BP35913 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.41■□□□□ 0.54
PDE6BP35913 SIGLEC18P-201ENST00000602271 909 ntBASIC18.41■□□□□ 0.54
PDE6BP35913 AC087392.5-201ENST00000612517 489 ntBASIC18.41■□□□□ 0.54
PDE6BP35913 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 CYP4F23P-201ENST00000593402 1579 ntBASIC18.41■□□□□ 0.54
PDE6BP35913 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PDE6BP35913 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.41■□□□□ 0.54
PDE6BP35913 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
PDE6BP35913 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PDE6BP35913 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.41■□□□□ 0.54
PDE6BP35913 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDE6BP35913 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 AL359258.3-201ENST00000622910 2331 ntBASIC18.4■□□□□ 0.54
PDE6BP35913 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDE6BP35913 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.4■□□□□ 0.54
PDE6BP35913 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.4■□□□□ 0.54
PDE6BP35913 BANF1P3-201ENST00000412556 261 ntBASIC18.4■□□□□ 0.54
PDE6BP35913 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.4■□□□□ 0.54
PDE6BP35913 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.4■□□□□ 0.54
PDE6BP35913 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.4■□□□□ 0.54
PDE6BP35913 PIN4P1-201ENST00000451079 396 ntBASIC18.4■□□□□ 0.54
PDE6BP35913 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.4■□□□□ 0.54
PDE6BP35913 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.4■□□□□ 0.54
PDE6BP35913 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.4■□□□□ 0.54
PDE6BP35913 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 LINC01165-201ENST00000445190 1623 ntBASIC18.4■□□□□ 0.54
PDE6BP35913 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.4■□□□□ 0.54
PDE6BP35913 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
PDE6BP35913 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6BP35913 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDE6BP35913 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE6BP35913 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 AC105250.1-201ENST00000509378 2057 ntBASIC18.39■□□□□ 0.53
PDE6BP35913 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE6BP35913 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PDE6BP35913 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PDE6BP35913 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 MIR557-201ENST00000385239 98 ntBASIC18.39■□□□□ 0.53
PDE6BP35913 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PDE6BP35913 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.39■□□□□ 0.53
PDE6BP35913 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6BP35913 AC018463.1-201ENST00000456674 917 ntBASIC18.39■□□□□ 0.53
PDE6BP35913 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.39■□□□□ 0.53
PDE6BP35913 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE6BP35913 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.39■□□□□ 0.53
PDE6BP35913 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.39■□□□□ 0.53
PDE6BP35913 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms