Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN1P35523 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN1P35523 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN1P35523 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN1P35523 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 AC005829.1-201ENST00000570002 483 ntBASIC17.29■□□□□ 0.36
CLCN1P35523 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CLCN1P35523 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLCN1P35523 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN1P35523 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN1P35523 AC106818.1-201ENST00000623223 3242 ntBASIC17.28■□□□□ 0.36
CLCN1P35523 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLCN1P35523 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLCN1P35523 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CLCN1P35523 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 CEND1P1-201ENST00000451006 455 ntBASIC17.28■□□□□ 0.36
CLCN1P35523 AC069335.1-201ENST00000489972 472 ntBASIC17.28■□□□□ 0.36
CLCN1P35523 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.28■□□□□ 0.36
CLCN1P35523 YBX1P5-201ENST00000509441 847 ntBASIC17.28■□□□□ 0.36
CLCN1P35523 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN1P35523 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCN1P35523 KRT8P23-201ENST00000560090 1207 ntBASIC17.28■□□□□ 0.36
CLCN1P35523 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN1P35523 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 AC105339.1-204ENST00000636249 355 ntBASIC17.28■□□□□ 0.36
CLCN1P35523 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN1P35523 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLCN1P35523 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN1P35523 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN1P35523 AC134407.2-201ENST00000625089 1978 ntBASIC17.28■□□□□ 0.36
CLCN1P35523 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN1P35523 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLCN1P35523 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLCN1P35523 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCN1P35523 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLCN1P35523 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLCN1P35523 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLCN1P35523 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN1P35523 FAM220BP-201ENST00000377689 816 ntBASIC17.27■□□□□ 0.36
CLCN1P35523 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCN1P35523 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCN1P35523 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCN1P35523 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms