Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.23■□□□□ 0.03
LSP1P33241 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.23■□□□□ 0.03
LSP1P33241 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.23■□□□□ 0.03
LSP1P33241 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LSP1P33241 AC005593.1-201ENST00000624894 515 ntBASIC15.23■□□□□ 0.03
LSP1P33241 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.23■□□□□ 0.03
LSP1P33241 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LSP1P33241 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LSP1P33241 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LSP1P33241 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LSP1P33241 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.23■□□□□ 0.03
LSP1P33241 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LSP1P33241 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.23■□□□□ 0.03
LSP1P33241 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.23■□□□□ 0.03
LSP1P33241 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.23■□□□□ 0.03
LSP1P33241 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LSP1P33241 AC018665.1-201ENST00000622927 1362 ntBASIC15.23■□□□□ 0.03
LSP1P33241 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.23■□□□□ 0.03
LSP1P33241 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LSP1P33241 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
LSP1P33241 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.22■□□□□ 0.03
LSP1P33241 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
LSP1P33241 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.22■□□□□ 0.03
LSP1P33241 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.22■□□□□ 0.03
LSP1P33241 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.22■□□□□ 0.03
LSP1P33241 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.22■□□□□ 0.03
LSP1P33241 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 AL645728.2-202ENST00000641679 227 ntBASIC15.22■□□□□ 0.03
LSP1P33241 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
LSP1P33241 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
LSP1P33241 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC15.22■□□□□ 0.03
LSP1P33241 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.22■□□□□ 0.03
LSP1P33241 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LSP1P33241 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LSP1P33241 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.21■□□□□ 0.03
LSP1P33241 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.21■□□□□ 0.03
LSP1P33241 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.21■□□□□ 0.03
LSP1P33241 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LSP1P33241 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LSP1P33241 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LSP1P33241 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
LSP1P33241 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.21■□□□□ 0.03
LSP1P33241 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.21■□□□□ 0.03
LSP1P33241 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.21■□□□□ 0.03
LSP1P33241 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.21■□□□□ 0.03
LSP1P33241 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.21■□□□□ 0.03
LSP1P33241 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.21■□□□□ 0.03
LSP1P33241 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LSP1P33241 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.21■□□□□ 0.03
LSP1P33241 MIR497HG-202ENST00000572453 3838 ntBASIC15.21■□□□□ 0.03
LSP1P33241 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.21■□□□□ 0.03
LSP1P33241 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.21■□□□□ 0.03
LSP1P33241 REXO1L6P-202ENST00000619970 1078 ntBASIC15.21■□□□□ 0.03
LSP1P33241 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.21■□□□□ 0.03
LSP1P33241 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LSP1P33241 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms