Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HOXC12P31275 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.49□□□□□ -0.25
HOXC12P31275 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.49□□□□□ -0.25
HOXC12P31275 AL645728.2-202ENST00000641679 227 ntBASIC13.49□□□□□ -0.25
HOXC12P31275 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HOXC12P31275 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HOXC12P31275 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HOXC12P31275 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.49□□□□□ -0.25
HOXC12P31275 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HOXC12P31275 AC090616.6-203ENST00000579186 1945 ntBASIC13.49□□□□□ -0.25
HOXC12P31275 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.49□□□□□ -0.25
HOXC12P31275 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.48□□□□□ -0.25
HOXC12P31275 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
HOXC12P31275 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
HOXC12P31275 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HOXC12P31275 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
HOXC12P31275 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.48□□□□□ -0.25
HOXC12P31275 MIR1247-201ENST00000408206 136 ntBASIC13.48□□□□□ -0.25
HOXC12P31275 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 BCRP2-202ENST00000447763 634 ntBASIC13.48□□□□□ -0.25
HOXC12P31275 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.48□□□□□ -0.25
HOXC12P31275 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.48□□□□□ -0.25
HOXC12P31275 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.48□□□□□ -0.25
HOXC12P31275 BCRP6-201ENST00000510112 632 ntBASIC13.48□□□□□ -0.25
HOXC12P31275 BCRP7-201ENST00000511549 544 ntBASIC13.48□□□□□ -0.25
HOXC12P31275 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.48□□□□□ -0.25
HOXC12P31275 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.48□□□□□ -0.25
HOXC12P31275 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.48□□□□□ -0.25
HOXC12P31275 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.48□□□□□ -0.25
HOXC12P31275 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.48□□□□□ -0.25
HOXC12P31275 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HOXC12P31275 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.48□□□□□ -0.25
HOXC12P31275 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.48□□□□□ -0.25
HOXC12P31275 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HOXC12P31275 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 AC007950.2-201ENST00000615045 2347 ntBASIC13.47□□□□□ -0.25
HOXC12P31275 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HOXC12P31275 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.47□□□□□ -0.25
HOXC12P31275 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.47□□□□□ -0.25
HOXC12P31275 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HOXC12P31275 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HOXC12P31275 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms