Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 AC004066.1-201ENST00000502488 802 ntBASIC12.88□□□□□ -0.35
HIST1H1DP16402 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 AC087386.2-201ENST00000623212 4637 ntBASIC12.88□□□□□ -0.35
HIST1H1DP16402 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H1DP16402 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H1DP16402 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 SPDYE7P-202ENST00000420373 878 ntBASIC12.87□□□□□ -0.35
HIST1H1DP16402 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 AC005829.1-201ENST00000570002 483 ntBASIC12.87□□□□□ -0.35
HIST1H1DP16402 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 AC000095.1-201ENST00000603208 874 ntBASIC12.87□□□□□ -0.35
HIST1H1DP16402 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.87□□□□□ -0.35
HIST1H1DP16402 AC009093.7-201ENST00000623853 1223 ntBASIC12.87□□□□□ -0.35
HIST1H1DP16402 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H1DP16402 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 AL157414.3-201ENST00000624276 1954 ntBASIC12.87□□□□□ -0.35
HIST1H1DP16402 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H1DP16402 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms