Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXC6P09630 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HOXC6P09630 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
HOXC6P09630 AC090616.6-203ENST00000579186 1945 ntBASIC16.9■□□□□ 0.3
HOXC6P09630 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXC6P09630 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HOXC6P09630 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HOXC6P09630 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.89■□□□□ 0.3
HOXC6P09630 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.89■□□□□ 0.3
HOXC6P09630 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HOXC6P09630 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HOXC6P09630 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
HOXC6P09630 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.89■□□□□ 0.3
HOXC6P09630 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC6P09630 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HOXC6P09630 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.89■□□□□ 0.29
HOXC6P09630 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.89■□□□□ 0.29
HOXC6P09630 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC6P09630 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
HOXC6P09630 PGAM1P5-201ENST00000548011 764 ntBASIC16.89■□□□□ 0.29
HOXC6P09630 AC026803.1-201ENST00000569130 274 ntBASIC16.89■□□□□ 0.29
HOXC6P09630 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC6P09630 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC6P09630 AC087045.2-201ENST00000606279 1003 ntBASIC16.89■□□□□ 0.29
HOXC6P09630 AC092171.5-201ENST00000608012 942 ntBASIC16.89■□□□□ 0.29
HOXC6P09630 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.89■□□□□ 0.29
HOXC6P09630 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC6P09630 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
HOXC6P09630 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
HOXC6P09630 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 AC136759.1-202ENST00000530858 2194 ntBASIC16.89■□□□□ 0.29
HOXC6P09630 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC6P09630 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HOXC6P09630 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC6P09630 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC6P09630 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC6P09630 AC132872.4-202ENST00000622924 2756 ntBASIC16.89■□□□□ 0.29
HOXC6P09630 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HOXC6P09630 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC6P09630 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 AC003102.2-201ENST00000589195 1469 ntBASIC16.88■□□□□ 0.29
HOXC6P09630 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC6P09630 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC6P09630 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.88■□□□□ 0.29
HOXC6P09630 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC6P09630 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC6P09630 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC6P09630 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HOXC6P09630 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.88■□□□□ 0.29
HOXC6P09630 YRDCP1-201ENST00000621419 643 ntBASIC16.88■□□□□ 0.29
HOXC6P09630 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC6P09630 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC6P09630 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC6P09630 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC6P09630 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HOXC6P09630 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HOXC6P09630 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC6P09630 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC6P09630 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.88■□□□□ 0.29
HOXC6P09630 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.87■□□□□ 0.29
HOXC6P09630 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC6P09630 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms