Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
TCRAP04437 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.56□□□□□ -0.56
TCRAP04437 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 ACTG1P14-201ENST00000446382 1122 ntBASIC11.56□□□□□ -0.56
TCRAP04437 KRT18P3-201ENST00000451602 1288 ntBASIC11.56□□□□□ -0.56
TCRAP04437 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
TCRAP04437 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.56□□□□□ -0.56
TCRAP04437 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
TCRAP04437 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 Z97205.2-201ENST00000564697 1639 ntBASIC11.56□□□□□ -0.56
TCRAP04437 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.56□□□□□ -0.56
TCRAP04437 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.56□□□□□ -0.56
TCRAP04437 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 AC015922.1-201ENST00000421102 1152 ntBASIC11.55□□□□□ -0.56
TCRAP04437 MED15P5-201ENST00000423150 992 ntBASIC11.55□□□□□ -0.56
TCRAP04437 KRT18P64-201ENST00000434946 1219 ntBASIC11.55□□□□□ -0.56
TCRAP04437 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 KRT18P43-201ENST00000469825 1281 ntBASIC11.55□□□□□ -0.56
TCRAP04437 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 ALG1L8P-201ENST00000533887 760 ntBASIC11.55□□□□□ -0.56
TCRAP04437 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.55□□□□□ -0.56
TCRAP04437 SAMD11P1-201ENST00000571429 661 ntBASIC11.55□□□□□ -0.56
TCRAP04437 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.55□□□□□ -0.56
TCRAP04437 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 AL133215.2-201ENST00000609242 977 ntBASIC11.55□□□□□ -0.56
TCRAP04437 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.55□□□□□ -0.56
TCRAP04437 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.55□□□□□ -0.56
TCRAP04437 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TCRAP04437 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms