Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.05■□□□□ 0.16
LCA5LO95447 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LCA5LO95447 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.05■□□□□ 0.16
LCA5LO95447 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.05■□□□□ 0.16
LCA5LO95447 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.05■□□□□ 0.16
LCA5LO95447 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.05■□□□□ 0.16
LCA5LO95447 AL139094.1-201ENST00000405549 1188 ntBASIC16.05■□□□□ 0.16
LCA5LO95447 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.05■□□□□ 0.16
LCA5LO95447 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.05■□□□□ 0.16
LCA5LO95447 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.05■□□□□ 0.16
LCA5LO95447 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.05■□□□□ 0.16
LCA5LO95447 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCA5LO95447 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 RARRES2P5-201ENST00000564013 466 ntBASIC16.05■□□□□ 0.16
LCA5LO95447 AC093813.1-201ENST00000605066 256 ntBASIC16.05■□□□□ 0.16
LCA5LO95447 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.05■□□□□ 0.16
LCA5LO95447 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCA5LO95447 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LCA5LO95447 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LCA5LO95447 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.05■□□□□ 0.16
LCA5LO95447 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCA5LO95447 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LCA5LO95447 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LCA5LO95447 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
LCA5LO95447 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LCA5LO95447 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LCA5LO95447 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.04■□□□□ 0.16
LCA5LO95447 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 AC012617.1-204ENST00000586340 2305 ntBASIC16.04■□□□□ 0.16
LCA5LO95447 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.04■□□□□ 0.16
LCA5LO95447 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.04■□□□□ 0.16
LCA5LO95447 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 AC025678.2-201ENST00000562061 970 ntBASIC16.04■□□□□ 0.16
LCA5LO95447 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
LCA5LO95447 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.04■□□□□ 0.16
LCA5LO95447 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 AL049840.4-201ENST00000602422 811 ntBASIC16.04■□□□□ 0.16
LCA5LO95447 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LCA5LO95447 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 MYADML-201ENST00000474610 2147 ntBASIC16.04■□□□□ 0.16
LCA5LO95447 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.04■□□□□ 0.16
LCA5LO95447 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.04■□□□□ 0.16
LCA5LO95447 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LCA5LO95447 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 TCAM1P-207ENST00000485295 1537 ntBASIC16.04■□□□□ 0.16
LCA5LO95447 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCA5LO95447 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.04■□□□□ 0.16
LCA5LO95447 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.03■□□□□ 0.16
LCA5LO95447 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCA5LO95447 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LCA5LO95447 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCA5LO95447 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LCA5LO95447 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.03■□□□□ 0.16
LCA5LO95447 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCA5LO95447 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCA5LO95447 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCA5LO95447 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.03■□□□□ 0.16
LCA5LO95447 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCA5LO95447 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms