Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 AC018665.1-201ENST00000622927 1362 ntBASIC13.71□□□□□ -0.21
SURF4O15260 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SURF4O15260 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.71□□□□□ -0.21
SURF4O15260 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.71□□□□□ -0.21
SURF4O15260 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.71□□□□□ -0.21
SURF4O15260 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.71□□□□□ -0.21
SURF4O15260 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SURF4O15260 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.71□□□□□ -0.21
SURF4O15260 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.71□□□□□ -0.21
SURF4O15260 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.71□□□□□ -0.21
SURF4O15260 AC010336.2-201ENST00000564226 506 ntBASIC13.71□□□□□ -0.21
SURF4O15260 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
SURF4O15260 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.71□□□□□ -0.21
SURF4O15260 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.71□□□□□ -0.21
SURF4O15260 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.71□□□□□ -0.21
SURF4O15260 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.71□□□□□ -0.21
SURF4O15260 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SURF4O15260 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SURF4O15260 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.71□□□□□ -0.21
SURF4O15260 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.71□□□□□ -0.21
SURF4O15260 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SURF4O15260 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SURF4O15260 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SURF4O15260 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
SURF4O15260 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SURF4O15260 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SURF4O15260 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.71□□□□□ -0.22
SURF4O15260 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SURF4O15260 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SURF4O15260 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SURF4O15260 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SURF4O15260 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.71□□□□□ -0.22
SURF4O15260 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.71□□□□□ -0.22
SURF4O15260 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.71□□□□□ -0.22
SURF4O15260 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.71□□□□□ -0.22
SURF4O15260 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
SURF4O15260 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
SURF4O15260 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.71□□□□□ -0.22
SURF4O15260 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SURF4O15260 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
SURF4O15260 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
SURF4O15260 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SURF4O15260 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SURF4O15260 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SURF4O15260 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SURF4O15260 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.7□□□□□ -0.22
SURF4O15260 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.7□□□□□ -0.22
SURF4O15260 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SURF4O15260 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SURF4O15260 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.7□□□□□ -0.22
SURF4O15260 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.7□□□□□ -0.22
SURF4O15260 HLA-V-204ENST00000476601 1289 ntBASIC13.7□□□□□ -0.22
SURF4O15260 RN7SL618P-201ENST00000477850 296 ntBASIC13.7□□□□□ -0.22
SURF4O15260 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
SURF4O15260 AC004066.1-201ENST00000502488 802 ntBASIC13.7□□□□□ -0.22
SURF4O15260 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.7□□□□□ -0.22
SURF4O15260 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.7□□□□□ -0.22
SURF4O15260 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.7□□□□□ -0.22
SURF4O15260 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.7□□□□□ -0.22
SURF4O15260 AC051619.7-201ENST00000568314 623 ntBASIC13.7□□□□□ -0.22
SURF4O15260 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.7□□□□□ -0.22
SURF4O15260 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SURF4O15260 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.7□□□□□ -0.22
SURF4O15260 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 TEX28P1-201ENST00000613479 1221 ntBASIC13.7□□□□□ -0.22
SURF4O15260 AC106028.4-201ENST00000614509 607 ntBASIC13.7□□□□□ -0.22
SURF4O15260 TEX28P2-201ENST00000617764 1221 ntBASIC13.7□□□□□ -0.22
SURF4O15260 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.7□□□□□ -0.22
SURF4O15260 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.7□□□□□ -0.22
SURF4O15260 AL109936.8-201ENST00000641772 604 ntBASIC13.7□□□□□ -0.22
SURF4O15260 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SURF4O15260 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SURF4O15260 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms