Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.17□□□□□ -0.46
UPK2O00526 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK2O00526 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
UPK2O00526 SPDYE18-201ENST00000510091 1050 ntBASIC12.17□□□□□ -0.46
UPK2O00526 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.17□□□□□ -0.46
UPK2O00526 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK2O00526 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.17□□□□□ -0.46
UPK2O00526 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.17□□□□□ -0.46
UPK2O00526 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.17□□□□□ -0.46
UPK2O00526 AC107373.2-201ENST00000607735 490 ntBASIC12.17□□□□□ -0.46
UPK2O00526 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 AC008738.7-201ENST00000609744 511 ntBASIC12.17□□□□□ -0.46
UPK2O00526 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.17□□□□□ -0.46
UPK2O00526 AL390754.1-201ENST00000619088 582 ntBASIC12.17□□□□□ -0.46
UPK2O00526 AC004840.1-201ENST00000636359 365 ntBASIC12.17□□□□□ -0.46
UPK2O00526 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.17□□□□□ -0.46
UPK2O00526 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
UPK2O00526 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
UPK2O00526 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UPK2O00526 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.17□□□□□ -0.46
UPK2O00526 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UPK2O00526 AC097359.2-201ENST00000604992 2389 ntBASIC12.16□□□□□ -0.46
UPK2O00526 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
UPK2O00526 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 AP001267.2-201ENST00000532619 2086 ntBASIC12.16□□□□□ -0.46
UPK2O00526 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
UPK2O00526 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 NUS1P3-201ENST00000423502 862 ntBASIC12.16□□□□□ -0.46
UPK2O00526 AC055876.3-201ENST00000431496 288 ntBASIC12.16□□□□□ -0.46
UPK2O00526 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.16□□□□□ -0.46
UPK2O00526 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.16□□□□□ -0.46
UPK2O00526 TPT1P11-201ENST00000458482 498 ntBASIC12.16□□□□□ -0.46
UPK2O00526 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.16□□□□□ -0.46
UPK2O00526 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 AL049840.4-201ENST00000602422 811 ntBASIC12.16□□□□□ -0.46
UPK2O00526 AC138649.4-201ENST00000612222 287 ntBASIC12.16□□□□□ -0.46
UPK2O00526 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
UPK2O00526 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 AC022144.1-201ENST00000602255 1580 ntBASIC12.16□□□□□ -0.46
UPK2O00526 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
UPK2O00526 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
UPK2O00526 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.16□□□□□ -0.46
UPK2O00526 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UPK2O00526 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UPK2O00526 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UPK2O00526 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms