Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXN3O00409 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXN3O00409 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXN3O00409 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXN3O00409 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.19■□□□□ 0.18
FOXN3O00409 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FOXN3O00409 TP53TG3HP-202ENST00000569755 579 ntBASIC16.19■□□□□ 0.18
FOXN3O00409 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
FOXN3O00409 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
FOXN3O00409 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FOXN3O00409 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
FOXN3O00409 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXN3O00409 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXN3O00409 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FOXN3O00409 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXN3O00409 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXN3O00409 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FOXN3O00409 AC055811.4-201ENST00000624039 1754 ntBASIC16.18■□□□□ 0.18
FOXN3O00409 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXN3O00409 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
FOXN3O00409 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
FOXN3O00409 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXN3O00409 DGCR5-201ENST00000399539 862 ntBASIC16.18■□□□□ 0.18
FOXN3O00409 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXN3O00409 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXN3O00409 AC093433.1-201ENST00000458048 571 ntBASIC16.18■□□□□ 0.18
FOXN3O00409 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXN3O00409 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.18■□□□□ 0.18
FOXN3O00409 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.18■□□□□ 0.18
FOXN3O00409 CU634019.7-201ENST00000624153 1185 ntBASIC16.18■□□□□ 0.18
FOXN3O00409 FP236241.2-201ENST00000624906 1185 ntBASIC16.18■□□□□ 0.18
FOXN3O00409 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXN3O00409 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXN3O00409 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXN3O00409 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXN3O00409 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXN3O00409 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXN3O00409 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 BX640514.1-201ENST00000583223 1918 ntBASIC16.17■□□□□ 0.18
FOXN3O00409 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
FOXN3O00409 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXN3O00409 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
FOXN3O00409 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXN3O00409 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXN3O00409 GIMAP3P-201ENST00000495150 836 ntBASIC16.17■□□□□ 0.18
FOXN3O00409 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.17■□□□□ 0.18
FOXN3O00409 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXN3O00409 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXN3O00409 AC140912.1-201ENST00000577171 1054 ntBASIC16.17■□□□□ 0.18
FOXN3O00409 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXN3O00409 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms