Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.01■□□□□ 0.31
DDX39AO00148 DBET-201ENST00000630918 3363 ntBASIC17.01■□□□□ 0.31
DDX39AO00148 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
DDX39AO00148 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX39AO00148 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
DDX39AO00148 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17■□□□□ 0.31
DDX39AO00148 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
DDX39AO00148 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
DDX39AO00148 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17■□□□□ 0.31
DDX39AO00148 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 AP003171.2-201ENST00000528208 925 ntBASIC17■□□□□ 0.31
DDX39AO00148 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17■□□□□ 0.31
DDX39AO00148 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17■□□□□ 0.31
DDX39AO00148 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17■□□□□ 0.31
DDX39AO00148 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
DDX39AO00148 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
DDX39AO00148 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX39AO00148 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
DDX39AO00148 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
DDX39AO00148 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
DDX39AO00148 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
DDX39AO00148 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.99■□□□□ 0.31
DDX39AO00148 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 COX5BP1-201ENST00000507622 393 ntBASIC16.99■□□□□ 0.31
DDX39AO00148 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.99■□□□□ 0.31
DDX39AO00148 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 DUX4L45-201ENST00000566406 1057 ntBASIC16.99■□□□□ 0.31
DDX39AO00148 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 PCDHA3-202ENST00000532566 4594 ntBASIC16.99■□□□□ 0.31
DDX39AO00148 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 WASH3P-207ENST00000560956 1394 ntBASIC16.99■□□□□ 0.31
DDX39AO00148 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.99■□□□□ 0.31
DDX39AO00148 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX39AO00148 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX39AO00148 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms