Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.73■□□□□ 0.43
VPS37CA5D8V6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS37CA5D8V6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS37CA5D8V6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS37CA5D8V6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS37CA5D8V6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS37CA5D8V6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS37CA5D8V6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 AL360270.3-201ENST00000609118 1348 ntBASIC17.72■□□□□ 0.43
VPS37CA5D8V6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 AL589987.1-201ENST00000453380 819 ntBASIC17.72■□□□□ 0.43
VPS37CA5D8V6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 AC067863.1-201ENST00000494933 530 ntBASIC17.72■□□□□ 0.43
VPS37CA5D8V6 AC004066.1-201ENST00000502488 802 ntBASIC17.72■□□□□ 0.43
VPS37CA5D8V6 SPDYE18-201ENST00000510091 1050 ntBASIC17.72■□□□□ 0.43
VPS37CA5D8V6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 ZNF890P-202ENST00000530367 1156 ntBASIC17.72■□□□□ 0.43
VPS37CA5D8V6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 AC027601.5-201ENST00000624065 2482 ntBASIC17.72■□□□□ 0.43
VPS37CA5D8V6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS37CA5D8V6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 MIR943-201ENST00000401286 94 ntBASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC114501.2-201ENST00000439631 535 ntBASIC17.71■□□□□ 0.43
VPS37CA5D8V6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC092337.1-201ENST00000568699 1129 ntBASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC015911.4-201ENST00000588022 1070 ntBASIC17.71■□□□□ 0.43
VPS37CA5D8V6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS37CA5D8V6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.71■□□□□ 0.42
VPS37CA5D8V6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VPS37CA5D8V6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms