Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AC234783.1-201ENST00000441761 496 ntBASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 GPR53P-205ENST00000457298 1084 ntBASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 ACA64.2-201ENST00000459014 129 ntBASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AC132938.4-201ENST00000623835 848 ntBASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGC4Q9Y5F7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 FO681548.1-201ENST00000455617 1132 ntBASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 AC023090.2-201ENST00000625182 2110 ntBASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 AL603764.1-201ENST00000636452 321 ntBASIC15.27■□□□□ 0.04
PCDHGC4Q9Y5F7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGC4Q9Y5F7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 LINC02228-204ENST00000642115 2962 ntBASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGC4Q9Y5F7 MIR1909-201ENST00000411312 80 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms