Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 AC002056.1-201ENST00000395613 760 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 AC098859.1-201ENST00000502915 1238 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 RNA5SP419-201ENST00000515908 135 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 KRT19P2-202ENST00000557173 1012 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 AC073389.1-201ENST00000595595 795 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 AC004877.2-201ENST00000623941 599 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 ACE3P-201ENST00000423435 1973 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 AC011474.4-201ENST00000623523 2076 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 MST1P2-201ENST00000457982 2291 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 MTHFR-210ENST00000641407 2387 ntBASIC13.01□□□□□ -0.33
COMMD9Q9P000 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD9Q9P000 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
COMMD9Q9P000 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
COMMD9Q9P000 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 AL450487.1-201ENST00000426799 995 ntBASIC13□□□□□ -0.33
COMMD9Q9P000 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13□□□□□ -0.33
COMMD9Q9P000 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13□□□□□ -0.33
COMMD9Q9P000 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13□□□□□ -0.33
COMMD9Q9P000 AC064836.3-201ENST00000607928 673 ntBASIC13□□□□□ -0.33
COMMD9Q9P000 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
COMMD9Q9P000 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms