Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC079140.4-201ENST00000507448 529 ntBASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 TRMT112-205ENST00000539854 659 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 AC127383.1-201ENST00000444697 1800 ntBASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 LMOD3-203ENST00000489031 2221 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AC020910.6-201ENST00000623084 1459 ntBASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AC037459.3-201ENST00000521025 2750 ntBASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AL391647.1-201ENST00000395664 511 ntBASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 DUX4L17-201ENST00000557360 1267 ntBASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AC011467.4-201ENST00000594891 528 ntBASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 PVT1_1.1-201ENST00000615125 194 ntBASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AP1B1-203ENST00000402502 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms