Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 HLA-V-204ENST00000476601 1289 ntBASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 RN7SL618P-201ENST00000477850 296 ntBASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 SDHAP3-202ENST00000515467 728 ntBASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 MIR3687-2-201ENST00000577708 61 ntBASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 MIR3687-1-201ENST00000614492 61 ntBASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 AL359881.3-201ENST00000602640 1721 ntBASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 AC138969.2-201ENST00000532739 9932 ntBASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE2Q9NRR3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms