Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 MCCD1P2-201ENST00000423228 335 ntBASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 FDX1P1-201ENST00000449115 551 ntBASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 AC069335.1-201ENST00000489972 472 ntBASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 AC003101.2-201ENST00000612557 442 ntBASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHMP1AQ9HD42 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 AC136604.1-201ENST00000418535 575 ntBASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 KRT18P32-201ENST00000424695 1287 ntBASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 HTR5BP-201ENST00000430851 1154 ntBASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 AL121894.2-201ENST00000602977 491 ntBASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 WASH3P-207ENST00000560956 1394 ntBASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 FO538757.1-201ENST00000623083 1397 ntBASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHMP1AQ9HD42 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.15□□□□□ -0.31
CHMP1AQ9HD42 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHMP1AQ9HD42 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.14□□□□□ -0.31
CHMP1AQ9HD42 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms