Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 AC092552.1-201ENST00000547243 906 ntBASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 AC124283.3-201ENST00000570869 594 ntBASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 AL132655.2-201ENST00000596276 594 ntBASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 AC004233.3-201ENST00000607794 1269 ntBASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC40Q9H9A6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 AC007541.1-201ENST00000570282 1469 ntBASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 SOCS2P1-201ENST00000417727 557 ntBASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 KRT8P22-201ENST00000562317 1415 ntBASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC40Q9H9A6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 AL139094.1-201ENST00000405549 1188 ntBASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 SPDYE22P-201ENST00000582158 798 ntBASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRRC40Q9H9A6 TMEM261P1-201ENST00000604899 340 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms