Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HDHD3Q9BSH5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
HDHD3Q9BSH5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HDHD3Q9BSH5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HDHD3Q9BSH5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HDHD3Q9BSH5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HDHD3Q9BSH5 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.83□□□□□ -0.35
HDHD3Q9BSH5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.83□□□□□ -0.35
HDHD3Q9BSH5 PTENP1-202ENST00000532280 3996 ntBASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC211486.1-202ENST00000416371 468 ntBASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 BX842568.4-201ENST00000421222 227 ntBASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 HLA-V-204ENST00000476601 1289 ntBASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC211476.1-201ENST00000503899 468 ntBASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC069262.1-201ENST00000539058 672 ntBASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC027612.4-201ENST00000605371 583 ntBASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HDHD3Q9BSH5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 323.5 ms