Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 AC008494.3-201ENST00000606615 944 ntBASIC14.3□□□□□ -0.12
TREX2Q9BQ50 AC099568.2-201ENST00000609194 695 ntBASIC14.3□□□□□ -0.12
TREX2Q9BQ50 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.3□□□□□ -0.12
TREX2Q9BQ50 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.3□□□□□ -0.12
TREX2Q9BQ50 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 AC140479.7-201ENST00000636301 2332 ntBASIC14.3□□□□□ -0.12
TREX2Q9BQ50 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.3□□□□□ -0.12
TREX2Q9BQ50 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AC104581.4-201ENST00000623126 3052 ntBASIC14.29□□□□□ -0.12
TREX2Q9BQ50 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AC005912.2-201ENST00000619492 2400 ntBASIC14.29□□□□□ -0.12
TREX2Q9BQ50 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 SPDYE19P-201ENST00000338590 713 ntBASIC14.29□□□□□ -0.12
TREX2Q9BQ50 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AC055876.2-201ENST00000531834 546 ntBASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 RAB43P1-201ENST00000561790 589 ntBASIC14.29□□□□□ -0.12
TREX2Q9BQ50 WASH4P-201ENST00000564273 1246 ntBASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AC004461.2-201ENST00000629517 803 ntBASIC14.29□□□□□ -0.12
TREX2Q9BQ50 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.29□□□□□ -0.12
TREX2Q9BQ50 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TREX2Q9BQ50 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TREX2Q9BQ50 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms