Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 AC023090.2-201ENST00000625182 2110 ntBASIC12.35□□□□□ -0.43
RAB40CQ96S21 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB40CQ96S21 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RAB40CQ96S21 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 LILRP1-201ENST00000444199 1370 ntBASIC12.34□□□□□ -0.43
RAB40CQ96S21 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 MIR574-201ENST00000385209 96 ntBASIC12.34□□□□□ -0.43
RAB40CQ96S21 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 TARDBPP1-201ENST00000442013 1203 ntBASIC12.34□□□□□ -0.43
RAB40CQ96S21 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 AC022447.6-201ENST00000515522 438 ntBASIC12.34□□□□□ -0.43
RAB40CQ96S21 IGHV3-62-201ENST00000520057 340 ntBASIC12.34□□□□□ -0.43
RAB40CQ96S21 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 AL513190.1-201ENST00000621254 727 ntBASIC12.34□□□□□ -0.43
RAB40CQ96S21 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB40CQ96S21 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 AC079781.5-202ENST00000641784 3743 ntBASIC12.34□□□□□ -0.43
RAB40CQ96S21 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB40CQ96S21 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB40CQ96S21 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
RAB40CQ96S21 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB40CQ96S21 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
RAB40CQ96S21 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms