Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 HIST2H2BA-201ENST00000412169 381 ntBASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TUBGCP6Q96RT7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.96■□□□□ 0.62
TUBGCP6Q96RT7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
TUBGCP6Q96RT7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 AC103810.10-201ENST00000606504 343 ntBASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 FO393412.1-201ENST00000619841 382 ntBASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 AC009145.4-201ENST00000625119 1294 ntBASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBGCP6Q96RT7 KRT18P9-201ENST00000604826 1300 ntBASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 AC244250.3-201ENST00000620749 366 ntBASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 ZBED1P1-201ENST00000502364 1930 ntBASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBGCP6Q96RT7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms