Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 RPL37AP1-201ENST00000412502 279 ntBASIC15.67■□□□□ 0.1
C9orf72Q96LT7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 AC025181.2-201ENST00000606994 802 ntBASIC15.67■□□□□ 0.1
C9orf72Q96LT7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.67■□□□□ 0.1
C9orf72Q96LT7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.67■□□□□ 0.1
C9orf72Q96LT7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 AC087499.5-201ENST00000452760 1342 ntBASIC15.66■□□□□ 0.1
C9orf72Q96LT7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C9orf72Q96LT7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C9orf72Q96LT7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C9orf72Q96LT7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C9orf72Q96LT7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C9orf72Q96LT7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.65■□□□□ 0.1
C9orf72Q96LT7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.65■□□□□ 0.1
C9orf72Q96LT7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.65■□□□□ 0.1
C9orf72Q96LT7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms