Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 AL033527.5-201ENST00000641382 801 ntBASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 AC007686.3-201ENST00000619017 3487 ntBASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 KRT8P35-201ENST00000483942 1338 ntBASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 ACTG1P3-201ENST00000431775 1114 ntBASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 TERF1P3-201ENST00000505638 1227 ntBASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 AL355385.1-201ENST00000606123 409 ntBASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 AC063926.3-201ENST00000624734 5658 ntBASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
PDLIM5Q96HC4 CICP4-201ENST00000447359 2812 ntBASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 AP001267.2-201ENST00000532619 2086 ntBASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 AC007969.1-201ENST00000433675 447 ntBASIC14.74□□□□□ -0.05
PDLIM5Q96HC4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms