Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD5Q8TDI0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHD5Q8TDI0 AP001267.2-201ENST00000532619 2086 ntBASIC15.12■□□□□ 0.01
CHD5Q8TDI0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.12■□□□□ 0.01
CHD5Q8TDI0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHD5Q8TDI0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD5Q8TDI0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD5Q8TDI0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHD5Q8TDI0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHD5Q8TDI0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 BTBD6P1-201ENST00000412176 1267 ntBASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 TPT1P11-201ENST00000458482 498 ntBASIC15.11■□□□□ 0.01
CHD5Q8TDI0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 MIR4538-201ENST00000581377 78 ntBASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AC006033.1-201ENST00000440505 426 ntBASIC15.11■□□□□ 0.01
CHD5Q8TDI0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AC005324.6-201ENST00000587972 613 ntBASIC15.11■□□□□ 0.01
CHD5Q8TDI0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 AC139712.1-201ENST00000378256 1875 ntBASIC15.11■□□□□ 0.01
CHD5Q8TDI0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHD5Q8TDI0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 LINC00552-201ENST00000625151 2579 ntBASIC15.1■□□□□ 0.01
CHD5Q8TDI0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHD5Q8TDI0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms