Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.3□□□□□ -0.28
CPEB3Q8NE35 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 RN7SL692P-201ENST00000464677 288 ntBASIC13.29□□□□□ -0.28
CPEB3Q8NE35 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPEB3Q8NE35 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 RNU1-114P-201ENST00000365297 166 ntBASIC13.28□□□□□ -0.28
CPEB3Q8NE35 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 AC093433.1-201ENST00000458048 571 ntBASIC13.28□□□□□ -0.28
CPEB3Q8NE35 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.28□□□□□ -0.28
CPEB3Q8NE35 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms