Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC116165.1-201ENST00000611806 668 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC007191.1-201ENST00000623179 2995 ntBASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00346Q8IVM7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 SPDYE19P-201ENST00000338590 713 ntBASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 AC107373.2-201ENST00000607735 490 ntBASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00346Q8IVM7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00346Q8IVM7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00346Q8IVM7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00346Q8IVM7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
LINC00346Q8IVM7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00346Q8IVM7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00346Q8IVM7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00346Q8IVM7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 GNAQP1-201ENST00000444815 1067 ntBASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms