Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AL391825.1-201ENST00000457671 1364 ntBASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AL158070.2-201ENST00000623713 1621 ntBASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 NUS1P3-201ENST00000423502 862 ntBASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AL442647.2-201ENST00000429864 857 ntBASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 SERBP1P5-201ENST00000510079 1181 ntBASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AC120045.2-201ENST00000567334 178 ntBASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AC093726.1-201ENST00000608064 963 ntBASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST2H3AQ71DI3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AC134915.1-201ENST00000426461 574 ntBASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 FAM207CP-201ENST00000443486 507 ntBASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 AC087386.2-201ENST00000623212 4637 ntBASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 INTS4P2-202ENST00000614726 2019 ntBASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST2H3AQ71DI3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms