Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2B3Q16720 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 AC073413.1-201ENST00000603927 732 ntBASIC18.54■□□□□ 0.56
ATP2B3Q16720 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2B3Q16720 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2B3Q16720 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2B3Q16720 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2B3Q16720 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2B3Q16720 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2B3Q16720 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2B3Q16720 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2B3Q16720 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 FTLP10-202ENST00000505798 471 ntBASIC18.53■□□□□ 0.56
ATP2B3Q16720 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 RN7SL713P-201ENST00000582127 302 ntBASIC18.53■□□□□ 0.56
ATP2B3Q16720 EEF1DP1-201ENST00000585891 896 ntBASIC18.53■□□□□ 0.56
ATP2B3Q16720 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 MIR6869-201ENST00000619434 62 ntBASIC18.53■□□□□ 0.56
ATP2B3Q16720 AC138035.3-201ENST00000622706 2791 ntBASIC18.53■□□□□ 0.56
ATP2B3Q16720 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ATP2B3Q16720 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2B3Q16720 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 FAM45BP-202ENST00000592932 1624 ntBASIC18.52■□□□□ 0.56
ATP2B3Q16720 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 MIR4525-201ENST00000580000 75 ntBASIC18.52■□□□□ 0.56
ATP2B3Q16720 PPY2P-201ENST00000582808 702 ntBASIC18.52■□□□□ 0.56
ATP2B3Q16720 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2B3Q16720 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2B3Q16720 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP2B3Q16720 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2B3Q16720 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP2B3Q16720 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2B3Q16720 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ATP2B3Q16720 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP2B3Q16720 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2B3Q16720 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2B3Q16720 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2B3Q16720 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ATP2B3Q16720 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2B3Q16720 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms