Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.29□□□□□ -0.12
SMSP52788 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SMSP52788 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.29□□□□□ -0.12
SMSP52788 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.29□□□□□ -0.12
SMSP52788 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.29□□□□□ -0.12
SMSP52788 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 MIR8072-201ENST00000614241 80 ntBASIC14.29□□□□□ -0.12
SMSP52788 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SMSP52788 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.29□□□□□ -0.12
SMSP52788 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SMSP52788 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.29□□□□□ -0.12
SMSP52788 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMSP52788 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 RPL5P21-201ENST00000404620 815 ntBASIC14.28□□□□□ -0.12
SMSP52788 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 CLK3P2-201ENST00000427566 1453 ntBASIC14.28□□□□□ -0.12
SMSP52788 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.28□□□□□ -0.12
SMSP52788 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.28□□□□□ -0.12
SMSP52788 EEF1DP4-201ENST00000446006 880 ntBASIC14.28□□□□□ -0.12
SMSP52788 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.28□□□□□ -0.12
SMSP52788 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.28□□□□□ -0.12
SMSP52788 AC104989.1-201ENST00000519711 778 ntBASIC14.28□□□□□ -0.12
SMSP52788 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.28□□□□□ -0.12
SMSP52788 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.28□□□□□ -0.12
SMSP52788 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 WASH3P-207ENST00000560956 1394 ntBASIC14.28□□□□□ -0.12
SMSP52788 RARRES2P5-201ENST00000564013 466 ntBASIC14.28□□□□□ -0.12
SMSP52788 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.28□□□□□ -0.12
SMSP52788 CYP4F24P-201ENST00000586049 1580 ntBASIC14.28□□□□□ -0.12
SMSP52788 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 WFDC1-204ENST00000613603 549 ntBASIC14.28□□□□□ -0.12
SMSP52788 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.28□□□□□ -0.12
SMSP52788 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.28□□□□□ -0.12
SMSP52788 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.28□□□□□ -0.12
SMSP52788 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SMSP52788 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.28□□□□□ -0.12
SMSP52788 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 CICP14-201ENST00000629111 2732 ntBASIC14.28□□□□□ -0.12
SMSP52788 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMSP52788 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SMSP52788 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMSP52788 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMSP52788 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMSP52788 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.27□□□□□ -0.12
SMSP52788 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMSP52788 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.27□□□□□ -0.12
SMSP52788 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.27□□□□□ -0.12
SMSP52788 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMSP52788 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMSP52788 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.27□□□□□ -0.12
SMSP52788 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SMSP52788 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms