Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.92□□□□□ -0.02
GTF2A1P52655 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
GTF2A1P52655 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC14.92□□□□□ -0.02
GTF2A1P52655 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 AL445209.1-201ENST00000607269 3491 ntBASIC14.91□□□□□ -0.02
GTF2A1P52655 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GTF2A1P52655 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.91□□□□□ -0.02
GTF2A1P52655 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GTF2A1P52655 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.91□□□□□ -0.02
GTF2A1P52655 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.91□□□□□ -0.02
GTF2A1P52655 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.91□□□□□ -0.02
GTF2A1P52655 AC011498.5-201ENST00000592027 486 ntBASIC14.91□□□□□ -0.02
GTF2A1P52655 AC097493.4-201ENST00000641197 219 ntBASIC14.91□□□□□ -0.02
GTF2A1P52655 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GTF2A1P52655 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GTF2A1P52655 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.91□□□□□ -0.02
GTF2A1P52655 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.91□□□□□ -0.02
GTF2A1P52655 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 ACE3P-201ENST00000423435 1973 ntBASIC14.91□□□□□ -0.02
GTF2A1P52655 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GTF2A1P52655 FP325330.2-201ENST00000624219 5630 ntBASIC14.91□□□□□ -0.02
GTF2A1P52655 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
GTF2A1P52655 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.9□□□□□ -0.02
GTF2A1P52655 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 ACTG1P4-201ENST00000425123 1122 ntBASIC14.9□□□□□ -0.02
GTF2A1P52655 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.9□□□□□ -0.02
GTF2A1P52655 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms