Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HTR3AP46098 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.07□□□□□ -0.16
HTR3AP46098 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.07□□□□□ -0.16
HTR3AP46098 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HTR3AP46098 RPL13AP25-201ENST00000484130 612 ntBASIC14.07□□□□□ -0.16
HTR3AP46098 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 AC093004.1-201ENST00000508850 424 ntBASIC14.07□□□□□ -0.16
HTR3AP46098 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.07□□□□□ -0.16
HTR3AP46098 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.07□□□□□ -0.16
HTR3AP46098 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.07□□□□□ -0.16
HTR3AP46098 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HTR3AP46098 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.07□□□□□ -0.16
HTR3AP46098 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
HTR3AP46098 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 AC140479.7-201ENST00000636301 2332 ntBASIC14.07□□□□□ -0.16
HTR3AP46098 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR3AP46098 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HTR3AP46098 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HTR3AP46098 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HTR3AP46098 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.06□□□□□ -0.16
HTR3AP46098 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR3AP46098 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 AL161772.1-201ENST00000610494 4412 ntBASIC14.06□□□□□ -0.16
HTR3AP46098 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.06□□□□□ -0.16
HTR3AP46098 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
HTR3AP46098 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HTR3AP46098 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HTR3AP46098 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.06□□□□□ -0.16
HTR3AP46098 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 AC023024.2-201ENST00000623561 1993 ntBASIC14.06□□□□□ -0.16
HTR3AP46098 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HTR3AP46098 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HTR3AP46098 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR3AP46098 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.06□□□□□ -0.16
HTR3AP46098 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR3AP46098 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 AL391069.4-201ENST00000609583 481 ntBASIC14.06□□□□□ -0.16
HTR3AP46098 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.06□□□□□ -0.16
HTR3AP46098 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HTR3AP46098 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR3AP46098 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HTR3AP46098 AL356585.2-201ENST00000625078 2396 ntBASIC14.05□□□□□ -0.16
HTR3AP46098 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR3AP46098 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HTR3AP46098 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HTR3AP46098 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR3AP46098 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HTR3AP46098 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR3AP46098 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR3AP46098 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HTR3AP46098 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms