Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS2P33552 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS2P33552 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS2P33552 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS2P33552 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.21□□□□□ -0.61
CKS2P33552 AL139010.1-201ENST00000454878 894 ntBASIC11.21□□□□□ -0.61
CKS2P33552 TPT1P11-201ENST00000458482 498 ntBASIC11.21□□□□□ -0.61
CKS2P33552 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS2P33552 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.21□□□□□ -0.61
CKS2P33552 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.21□□□□□ -0.61
CKS2P33552 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.21□□□□□ -0.61
CKS2P33552 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.21□□□□□ -0.61
CKS2P33552 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.21□□□□□ -0.61
CKS2P33552 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 AC097359.3-201ENST00000603982 1210 ntBASIC11.21□□□□□ -0.61
CKS2P33552 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 REXO1L6P-202ENST00000619970 1078 ntBASIC11.21□□□□□ -0.61
CKS2P33552 AL161645.1-201ENST00000622716 1255 ntBASIC11.21□□□□□ -0.61
CKS2P33552 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 AP000550.4-202ENST00000639755 178 ntBASIC11.21□□□□□ -0.61
CKS2P33552 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CKS2P33552 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CKS2P33552 DGCR9-201ENST00000609630 2415 ntBASIC11.21□□□□□ -0.61
CKS2P33552 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
CKS2P33552 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CKS2P33552 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
CKS2P33552 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CKS2P33552 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CKS2P33552 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.21□□□□□ -0.62
CKS2P33552 AC023090.2-201ENST00000625182 2110 ntBASIC11.21□□□□□ -0.62
CKS2P33552 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CKS2P33552 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CKS2P33552 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CKS2P33552 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CKS2P33552 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.21□□□□□ -0.62
CKS2P33552 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.21□□□□□ -0.62
CKS2P33552 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CKS2P33552 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
CKS2P33552 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
CKS2P33552 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.21□□□□□ -0.62
CKS2P33552 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CKS2P33552 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 CYP4F24P-201ENST00000586049 1580 ntBASIC11.2□□□□□ -0.62
CKS2P33552 AL607033.1-201ENST00000623900 1599 ntBASIC11.2□□□□□ -0.62
CKS2P33552 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms