Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
GDF1P27539 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GDF1P27539 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GDF1P27539 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.74□□□□□ -0.21
GDF1P27539 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GDF1P27539 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.73□□□□□ -0.21
GDF1P27539 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 AC092658.1-201ENST00000505836 891 ntBASIC13.73□□□□□ -0.21
GDF1P27539 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.73□□□□□ -0.21
GDF1P27539 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.73□□□□□ -0.21
GDF1P27539 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.73□□□□□ -0.21
GDF1P27539 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.73□□□□□ -0.21
GDF1P27539 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.73□□□□□ -0.21
GDF1P27539 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
GDF1P27539 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDF1P27539 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.73□□□□□ -0.21
GDF1P27539 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
GDF1P27539 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GDF1P27539 TUBB1P2-201ENST00000422712 1306 ntBASIC13.72□□□□□ -0.21
GDF1P27539 TUBB1P1-201ENST00000503144 1300 ntBASIC13.72□□□□□ -0.21
GDF1P27539 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GDF1P27539 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.72□□□□□ -0.21
GDF1P27539 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.72□□□□□ -0.21
GDF1P27539 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.72□□□□□ -0.21
GDF1P27539 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GDF1P27539 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.72□□□□□ -0.21
GDF1P27539 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.72□□□□□ -0.21
GDF1P27539 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 DUX4L47-201ENST00000566374 394 ntBASIC13.72□□□□□ -0.21
GDF1P27539 DUX4L45-201ENST00000566406 1057 ntBASIC13.72□□□□□ -0.21
GDF1P27539 RN7SL560P-201ENST00000577943 264 ntBASIC13.72□□□□□ -0.21
GDF1P27539 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.72□□□□□ -0.21
GDF1P27539 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms