Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.31■□□□□ 0.04
XPAP23025 SNX29P1-201ENST00000548357 1007 ntBASIC15.31■□□□□ 0.04
XPAP23025 AC079316.1-201ENST00000548397 411 ntBASIC15.31■□□□□ 0.04
XPAP23025 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.31■□□□□ 0.04
XPAP23025 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.31■□□□□ 0.04
XPAP23025 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
XPAP23025 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.31■□□□□ 0.04
XPAP23025 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
XPAP23025 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
XPAP23025 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 AC126365.1-201ENST00000578585 1514 ntBASIC15.31■□□□□ 0.04
XPAP23025 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.31■□□□□ 0.04
XPAP23025 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.31■□□□□ 0.04
XPAP23025 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.31■□□□□ 0.04
XPAP23025 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.31■□□□□ 0.04
XPAP23025 AC112693.3-201ENST00000624819 1983 ntBASIC15.31■□□□□ 0.04
XPAP23025 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.31■□□□□ 0.04
XPAP23025 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
XPAP23025 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
XPAP23025 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
XPAP23025 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.3■□□□□ 0.04
XPAP23025 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.3■□□□□ 0.04
XPAP23025 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.3■□□□□ 0.04
XPAP23025 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.3■□□□□ 0.04
XPAP23025 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.3■□□□□ 0.04
XPAP23025 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
XPAP23025 KRT90P-201ENST00000549264 1064 ntBASIC15.3■□□□□ 0.04
XPAP23025 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
XPAP23025 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.3■□□□□ 0.04
XPAP23025 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.3■□□□□ 0.04
XPAP23025 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
XPAP23025 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
XPAP23025 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 REXO1L5P-201ENST00000622260 2098 ntBASIC15.3■□□□□ 0.04
XPAP23025 AC138951.2-201ENST00000623455 1161 ntBASIC15.3■□□□□ 0.04
XPAP23025 AC132938.4-201ENST00000623835 848 ntBASIC15.3■□□□□ 0.04
XPAP23025 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.3■□□□□ 0.04
XPAP23025 RHOXF1P1-202ENST00000635473 501 ntBASIC15.3■□□□□ 0.04
XPAP23025 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
XPAP23025 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.3■□□□□ 0.04
XPAP23025 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XPAP23025 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
XPAP23025 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
XPAP23025 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XPAP23025 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.29■□□□□ 0.04
XPAP23025 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XPAP23025 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
XPAP23025 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XPAP23025 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XPAP23025 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.29■□□□□ 0.04
XPAP23025 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.29■□□□□ 0.04
XPAP23025 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.29■□□□□ 0.04
XPAP23025 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XPAP23025 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
XPAP23025 KRT8P44-201ENST00000441609 1350 ntBASIC15.29■□□□□ 0.04
XPAP23025 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
XPAP23025 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.29■□□□□ 0.04
XPAP23025 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XPAP23025 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.29■□□□□ 0.04
XPAP23025 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.29■□□□□ 0.04
XPAP23025 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.29■□□□□ 0.04
XPAP23025 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.29■□□□□ 0.04
XPAP23025 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
XPAP23025 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms