Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
BCL3P20749 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 AL158070.2-201ENST00000623713 1621 ntBASIC12.92□□□□□ -0.34
BCL3P20749 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.92□□□□□ -0.34
BCL3P20749 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.92□□□□□ -0.34
BCL3P20749 RN7SL399P-201ENST00000471648 279 ntBASIC12.92□□□□□ -0.34
BCL3P20749 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.92□□□□□ -0.34
BCL3P20749 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.92□□□□□ -0.34
BCL3P20749 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.92□□□□□ -0.34
BCL3P20749 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.92□□□□□ -0.34
BCL3P20749 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.92□□□□□ -0.34
BCL3P20749 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
BCL3P20749 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.92□□□□□ -0.34
BCL3P20749 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
BCL3P20749 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BCL3P20749 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
BCL3P20749 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
BCL3P20749 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BCL3P20749 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BCL3P20749 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BCL3P20749 AC093525.8-201ENST00000624099 1342 ntBASIC12.91□□□□□ -0.34
BCL3P20749 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BCL3P20749 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BCL3P20749 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
BCL3P20749 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.91□□□□□ -0.34
BCL3P20749 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BCL3P20749 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BCL3P20749 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BCL3P20749 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.91□□□□□ -0.34
BCL3P20749 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
BCL3P20749 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.91□□□□□ -0.34
BCL3P20749 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.91□□□□□ -0.34
BCL3P20749 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms