Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
RAB4AP20338 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.71□□□□□ -0.54
RAB4AP20338 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB4AP20338 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 AC129492.6-201ENST00000611383 1305 ntBASIC11.7□□□□□ -0.54
RAB4AP20338 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
RAB4AP20338 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 AC139887.3-201ENST00000568585 713 ntBASIC11.7□□□□□ -0.54
RAB4AP20338 NKAPP1-205ENST00000585790 367 ntBASIC11.7□□□□□ -0.54
RAB4AP20338 AC092329.2-201ENST00000598402 547 ntBASIC11.7□□□□□ -0.54
RAB4AP20338 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 CCT7P1-201ENST00000406551 1611 ntBASIC11.7□□□□□ -0.54
RAB4AP20338 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.7□□□□□ -0.54
RAB4AP20338 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB4AP20338 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB4AP20338 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB4AP20338 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 ZBED1P1-201ENST00000502364 1930 ntBASIC11.69□□□□□ -0.54
RAB4AP20338 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.69□□□□□ -0.54
RAB4AP20338 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms