Protein–RNA interactions for Protein: P12036

NEFH, Neurofilament heavy polypeptide, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP12036 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.51■□□□□ 0.07
NEFHP12036 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.51■□□□□ 0.07
NEFHP12036 AC074386.1-202ENST00000463561 864 ntBASIC15.51■□□□□ 0.07
NEFHP12036 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.51■□□□□ 0.07
NEFHP12036 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.51■□□□□ 0.07
NEFHP12036 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.51■□□□□ 0.07
NEFHP12036 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC15.51■□□□□ 0.07
NEFHP12036 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NEFHP12036 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.51■□□□□ 0.07
NEFHP12036 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NEFHP12036 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.5■□□□□ 0.07
NEFHP12036 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.5■□□□□ 0.07
NEFHP12036 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NEFHP12036 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NEFHP12036 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NEFHP12036 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.5■□□□□ 0.07
NEFHP12036 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.5■□□□□ 0.07
NEFHP12036 AC009078.2-202ENST00000463353 338 ntBASIC15.5■□□□□ 0.07
NEFHP12036 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.5■□□□□ 0.07
NEFHP12036 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.5■□□□□ 0.07
NEFHP12036 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.5■□□□□ 0.07
NEFHP12036 RARRES2P8-201ENST00000566335 367 ntBASIC15.5■□□□□ 0.07
NEFHP12036 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 AC026979.3-201ENST00000607315 403 ntBASIC15.5■□□□□ 0.07
NEFHP12036 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 CES1P1-201ENST00000421606 1704 ntBASIC15.5■□□□□ 0.07
NEFHP12036 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
NEFHP12036 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 AL139385.1-201ENST00000611744 3272 ntBASIC15.5■□□□□ 0.07
NEFHP12036 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.5■□□□□ 0.07
NEFHP12036 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.5■□□□□ 0.07
NEFHP12036 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEFHP12036 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.5■□□□□ 0.07
NEFHP12036 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.5■□□□□ 0.07
NEFHP12036 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEFHP12036 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NEFHP12036 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NEFHP12036 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NEFHP12036 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEFHP12036 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
NEFHP12036 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEFHP12036 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NEFHP12036 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
NEFHP12036 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEFHP12036 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
NEFHP12036 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms