Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.58□□□□□ -0.56
TCRAP04437 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.58□□□□□ -0.56
TCRAP04437 AC022447.6-201ENST00000515522 438 ntBASIC11.58□□□□□ -0.56
TCRAP04437 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
TCRAP04437 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.58□□□□□ -0.56
TCRAP04437 AC023090.2-201ENST00000625182 2110 ntBASIC11.58□□□□□ -0.56
TCRAP04437 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.58□□□□□ -0.56
TCRAP04437 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.58□□□□□ -0.56
TCRAP04437 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.58□□□□□ -0.56
TCRAP04437 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.58□□□□□ -0.56
TCRAP04437 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TCRAP04437 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
TCRAP04437 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TCRAP04437 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TCRAP04437 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TCRAP04437 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TCRAP04437 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.58□□□□□ -0.56
TCRAP04437 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.58□□□□□ -0.56
TCRAP04437 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TCRAP04437 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 ZNF259P1-201ENST00000407656 1365 ntBASIC11.57□□□□□ -0.56
TCRAP04437 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.57□□□□□ -0.56
TCRAP04437 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.57□□□□□ -0.56
TCRAP04437 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.57□□□□□ -0.56
TCRAP04437 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.57□□□□□ -0.56
TCRAP04437 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.57□□□□□ -0.56
TCRAP04437 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.57□□□□□ -0.56
TCRAP04437 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.57□□□□□ -0.56
TCRAP04437 AC018529.1-201ENST00000613063 361 ntBASIC11.57□□□□□ -0.56
TCRAP04437 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.57□□□□□ -0.56
TCRAP04437 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.57□□□□□ -0.56
TCRAP04437 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TCRAP04437 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TCRAP04437 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.57□□□□□ -0.56
TCRAP04437 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TCRAP04437 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 AC018665.1-201ENST00000622927 1362 ntBASIC11.56□□□□□ -0.56
TCRAP04437 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
TCRAP04437 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TCRAP04437 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms