Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC9.11□□□□□ -0.95
APOBP04114 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
APOBP04114 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC9.11□□□□□ -0.95
APOBP04114 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 MPI-203ENST00000535694 1523 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC9.1□□□□□ -0.95
APOBP04114 BPIFB5P-201ENST00000457066 1099 ntBASIC9.1□□□□□ -0.95
APOBP04114 KRT8P2-201ENST00000556193 944 ntBASIC9.1□□□□□ -0.95
APOBP04114 RN7SL665P-201ENST00000578793 300 ntBASIC9.1□□□□□ -0.95
APOBP04114 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC9.1□□□□□ -0.95
APOBP04114 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC9.1□□□□□ -0.95
APOBP04114 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC9.1□□□□□ -0.95
APOBP04114 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 AC005274.1-201ENST00000623460 802 ntBASIC9.1□□□□□ -0.95
APOBP04114 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 BID-213ENST00000615414 2236 ntTSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 AC011270.2-201ENST00000624293 2550 ntBASIC9.1□□□□□ -0.95
APOBP04114 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 BLK-205ENST00000529894 2017 ntTSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 PGAM1P11-201ENST00000416729 680 ntBASIC9.1□□□□□ -0.95
APOBP04114 OR8T1P-201ENST00000421347 918 ntBASIC9.1□□□□□ -0.95
APOBP04114 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC9.1□□□□□ -0.95
APOBP04114 AC090136.2-201ENST00000517809 420 ntBASIC9.1□□□□□ -0.95
APOBP04114 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC9.1□□□□□ -0.95
APOBP04114 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 MT2A-202ENST00000561491 581 ntTSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 RN7SL357P-201ENST00000581065 298 ntBASIC9.1□□□□□ -0.95
APOBP04114 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC9.1□□□□□ -0.95
APOBP04114 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC9.1□□□□□ -0.95
APOBP04114 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
APOBP04114 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC9.1□□□□□ -0.95
APOBP04114 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC9.1□□□□□ -0.95
APOBP04114 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
APOBP04114 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 AL929302.1-201ENST00000426556 871 ntBASIC9.09□□□□□ -0.95
APOBP04114 RNA5SP406-201ENST00000516106 112 ntBASIC9.09□□□□□ -0.95
APOBP04114 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC9.09□□□□□ -0.95
APOBP04114 HERC2P11-201ENST00000562845 725 ntBASIC9.09□□□□□ -0.95
APOBP04114 AC100756.2-201ENST00000569537 736 ntBASIC9.09□□□□□ -0.95
APOBP04114 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms