Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGCRP04035 MIR6842-201ENST00000612539 65 ntBASIC16.94■□□□□ 0.3
HMGCRP04035 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMGCRP04035 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
HMGCRP04035 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 CICP6-201ENST00000457191 2729 ntBASIC16.94■□□□□ 0.3
HMGCRP04035 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMGCRP04035 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCRP04035 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMGCRP04035 AC127383.1-201ENST00000444697 1800 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
HMGCRP04035 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCRP04035 AC025271.4-201ENST00000621477 1726 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCRP04035 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 INE2-201ENST00000630399 1874 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 OR2K2-202ENST00000374428 1038 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 AP000356.3-201ENST00000382243 753 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 AC078875.1-201ENST00000431907 724 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 KLF2P1-201ENST00000447438 1042 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.93■□□□□ 0.3
HMGCRP04035 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HMGCRP04035 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGCRP04035 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGCRP04035 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HMGCRP04035 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGCRP04035 AC138894.2-201ENST00000602838 371 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 AC007718.1-201ENST00000621078 280 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGCRP04035 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 AC244394.1-201ENST00000435000 1665 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCRP04035 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HMGCRP04035 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCRP04035 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
HMGCRP04035 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCRP04035 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGCRP04035 KRT8P21-201ENST00000430398 1491 ntBASIC16.93■□□□□ 0.3
HMGCRP04035 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 PAUPAR-201ENST00000630360 2965 ntBASIC16.92■□□□□ 0.3
HMGCRP04035 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HMGCRP04035 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCRP04035 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 SCARNA21-201ENST00000517026 139 ntBASIC16.92■□□□□ 0.3
HMGCRP04035 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.92■□□□□ 0.3
HMGCRP04035 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCRP04035 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.92■□□□□ 0.3
HMGCRP04035 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.92■□□□□ 0.3
HMGCRP04035 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.92■□□□□ 0.3
HMGCRP04035 AC008825.2-201ENST00000603374 718 ntBASIC16.92■□□□□ 0.3
HMGCRP04035 MIR6756-201ENST00000616240 63 ntBASIC16.92■□□□□ 0.3
HMGCRP04035 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCRP04035 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGCRP04035 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms