Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
APOC3P02656 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC3P02656 AC072061.1-201ENST00000569710 2234 ntBASIC12.15□□□□□ -0.46
APOC3P02656 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC3P02656 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC3P02656 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC3P02656 AC010536.1-201ENST00000538868 2611 ntBASIC12.15□□□□□ -0.46
APOC3P02656 AC112176.1-201ENST00000565428 3024 ntBASIC12.15□□□□□ -0.46
APOC3P02656 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC3P02656 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC3P02656 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.15□□□□□ -0.47
APOC3P02656 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
APOC3P02656 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.15□□□□□ -0.47
APOC3P02656 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC3P02656 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.15□□□□□ -0.47
APOC3P02656 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.15□□□□□ -0.47
APOC3P02656 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.14□□□□□ -0.47
APOC3P02656 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.14□□□□□ -0.47
APOC3P02656 RPL5P21-201ENST00000404620 815 ntBASIC12.14□□□□□ -0.47
APOC3P02656 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 AC079602.3-201ENST00000623931 403 ntBASIC12.14□□□□□ -0.47
APOC3P02656 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 OR2I1P-208ENST00000641137 4948 ntBASIC12.14□□□□□ -0.47
APOC3P02656 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
APOC3P02656 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
APOC3P02656 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC3P02656 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
APOC3P02656 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
APOC3P02656 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
APOC3P02656 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
APOC3P02656 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC3P02656 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC3P02656 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC3P02656 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
APOC3P02656 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC3P02656 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC3P02656 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms